This page contains the tools and software packages we have developed here at UCSF or previously at other institutions. Please visit our GitHub page for our latest releases.
A software packge for systematic discovery of functional structural elements in RNA.
A suite of mutual information-based tools for module-level analysis of gene expression.
A motif discovery and characterization program based on mutual information, which was developed by Olivier Elemento and Noam Slonim in the Tavazoie lab. We have contributed to FIRE by expanding it to prokaryotic genomes.